PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_Sca006599G01
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 414aa    MW: 45674.1 Da    PI: 9.1603
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_Sca006599G01genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.85.4e-14330382557
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                      +r+rr++kNRe+A rsR+RK+a++ eLe +  +L++eN  Lk+ l el+ + +
  Gh_Sca006599G01 330 RRQRRMIKNRESAARSRARKQAYTVELEAELNQLKQENAHLKQALAELERKRK 382
                      79******************************************999997765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-13326387IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.737328380IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-14330383No hitNo description
PfamPF001704.0E-12330382IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.13E-10330379No hitNo description
CDDcd147074.34E-23330384No hitNo description
PROSITE patternPS000360333348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0010152Biological Processpollen maturation
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MVVSESEIGE VESPLQGANQ QQKNHPFSEL GRQSSIYSLT LDEFQHTLCD GGKNFGSMNM  60
DEFLTSIWNA EENQAINSNN NNTNHQINSA NKQDSDQVHL SFNETSSSKG IAKQPSLPRQ  120
GSLTLPAPLC RKTVDEVWSE IQRGQQGQGQ SNNSNVQNAD ENASTRRQPT FGEMTLEDFL  180
IKAGVVREQC MPPQPPSVLP SPHHQPPQYG LYQTGNNPTV SPGFVSRPVG FSGTAYQTMP  240
PGLNDGKTGG AYQPAAPPLT TVIYNGKVTG GGGYGPGKTI GGVAPVSPVS SERLCTNQVD  300
NAASQFGMEM VAVRGRQRII DGPIEKVVER RQRRMIKNRE SAARSRARKQ AYTVELEAEL  360
NQLKQENAHL KQALAELERK RKQQCFEEWK TKTQTKARKA RERLRIMRSL SCPL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012485807.10.0PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5-like isoform X1
SwissprotQ9SJN01e-121ABI5_ARATH; Protein ABSCISIC ACID-INSENSITIVE 5
TrEMBLA0A0B0PMC20.0A0A0B0PMC2_G
STRINGSolyc09g009490.2.11e-144(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM92012536
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36270.11e-109bZIP family protein